iGeneTech Bioscience Co., Ltd.
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Identification of gene variants in 130 Han Chinese patients with hypospadias by targeted next-generation sequencing.

Wanyu Zhang; Jinxiu Shi; Chenhui Zhang; Xincheng Jiang; Junqi Wang; Wei Wang; Defen Wang; Jihong Ni; Lifen Chen; Wenli Lu; Yuan Xiao; Weijing Ye; Zhiya Dong
Molecular genetics & genomic medicine 2019;7(8):e827 DOI:10.1002/mgg3.827
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BACKGROUND:
Hypospadias is a common congenital malformation of male external genitalia, which mainly manifests as an abnormal urethral opening on the ventral side of the penis. The etiology and clinical phenotype of hypospadias is highly heterogeneous, and its clinical diagnosis is challenging. Currently, over 70% of patients have an unknown etiology. Here, we performed a targeted analysis of gene mutations in 130 patients with hypospadias of unknown etiology to find the precise genetic cause.

METHODS:
We developed a targeted next-generation sequencing (NGS) panel, encompassing the exon coding regions of 105 genes involved in external genitalia and urogenital tract development and performed sequencing analysis on 130 children with hypospadias of unknown etiology.

RESULTS:
In total, 25 patients with hypospadias (19.2%) were found to have 20 mutations among the nine genes involved in external genitalia and urogenital tract development, including 16 reported and four novel mutation sites. Twenty-two patients (16.9%) had diagnostic variants. Multiple genetic mutations were identified in three of the 25 patients. Hypospadias combined with micropenis was the most common phenotype (68%) in 25 patients.

CONCLUSIONS:
Higher frequency mutations were identified in SRD5A2 (52%) and AR (24%) in our patient cohort. Middle or posterior hypospadias with micropenis may be significant indicators of genetic variations. Polygenic inheritance may be a rare genetic cause of hypospadias.